BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005A01LP1|AL425304
(899 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1793 1199 0.0
3x_Contig421 242 1e-63
>3x_Contig1793
Length = 40499
Score = 1199 bits (600), Expect = 0.0
Identities = 613/624 (98%)
Strand = Plus / Plus
Query: 276 gataaggatagaactagatatgacagactaaacaaaaggatgggatggaacgattcttca 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gataaggatagaactagatatgacagactaaacaaaaggatgggatggaacgattcttca 60
Query: 336 gatgggtctgaatgagctttaaattctacaaatatgtaataaatatgatgtcatttcatg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgggtctgaatgagctttaaattctacaaatatgtaataaatatgatgtcatttcatg 120
Query: 396 tgatgtcctcttctcatcacattttttcttactttccatacgtgttcatgtctcttcttt 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgatgtcctcttctcatcacattttttcttactttccatacgtgttcatgtctcttcttt 180
Query: 456 tggtaaagagaaacgtatggaatatcaacttcacttttgaatatgccattatttgggtat 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggtaaagagaaacgtatggaatatcaacttcacttttgaatatgccattatttgggtat 240
Query: 516 aactcgcagatgggtgtttccgtctttccacgtactaagacccatttgttttccgtttct 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aactcgcagatgggtgtttccgtctttccacgtactaagacccatttgttttccgtttct 300
Query: 576 cttaaggcccgamagaggttctcaggaatatacatgtagatgagggactgttcaagatca 635
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttaaggcccgaaagaggttctcaggaatatacatgtagatgagggactgttcaagatca 360
Query: 636 atagaatgaatcamagcaagtcccacaaattcagtgttaatttttgagttattcttcatc 695
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 361 atagaatgaatcaaagcaagtcccacaaattcagtgttaatttttgagtaattcttcatc 420
Query: 696 actgggaatatgcccttgaatagcamgtctggggtamtatctgcmctatgaagagcaacg 755
||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||
Sbjct: 421 actgggaatatgcccttgaatagcacgtctggggtactatctgccctatgaagagcaacg 480
Query: 756 accgtbccatctaaagatagtttgatatcatcgtgatacaaagagctattggaatattgg 815
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 accgtcccatctaaagatagtttgatatcatcgtgatacaaagagctattggaatattgg 540
Query: 816 agaaactcaaaamcaamtatacmgcggttgccaatagaagttagttgaggtttctgcatg 875
|||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaaactcaaaaccaactataccgcggttgccaatagaagttagttgaggtttctgcatg 600
Query: 876 accaatggattgattamaaaattt 899
|||||||||||||||| |||||||
Sbjct: 601 accaatggattgattacaaaattt 624
>3x_Contig421
Length = 2105
Score = 242 bits (121), Expect = 1e-63
Identities = 121/121 (100%)
Strand = Plus / Plus
Query: 1 gaactccaattgcagacgacgtagatataaacaggattgttaatgatgaacgttgcaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 gaactccaattgcagacgacgtagatataaacaggattgttaatgatgaacgttgcaaga 2044
Query: 61 acttttcgggtgcagatatcgccgcactggtccgagaatcatccgtcctggctctcaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 acttttcgggtgcagatatcgccgcactggtccgagaatcatccgtcctggctctcaaac 2104
Query: 121 g 121
|
Sbjct: 2105 g 2105
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6662
Number of Sequences: 1807
Number of extensions: 6662
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 2
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)